Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888455.1_cds_XP_016443045.1_38245
CDS Infomation

[gene=LOC107768427] [db_xref=GeneID:107768427] [protein=ribosomal RNA small subunit methyltransferase-like] [protein_id=XP_016443045.1] [location=complement(join(18506..19246,20125..20454))] [gbkey=CDS]
Sequence

ATGGCGGGAGGGAAGATGAGGAGAGATAAGCCCCACCGTGGTGCATCGGCCGGCGGCGGC
GGCTCAAATCCTCACTTCCAGGGAGGGATATCATTCCACAAATCAAAGGGTCAGCACATT
CTGAAAAATCCTCTATTGGTTGATTCTATTATCCAAAAAGCCGGAATTAAATCTACTGAC
GTCATCCTCGAAATTGGTCCTGGTACTGGTAACCTTACTAAGAAGCTTCTAGAAGCCGGA
AAGTCAGTTATTGCTGTTGAGCTTGATCCTCGTATGGTTCTCGAATTGCAACGAAGGTTT
CAGGGTACTCCTTTATCTAACCGACTCAAGGTTATACAAGGAGATGTCCTCAAATGTGAT
CTCCCTTACTTTGACATTTGTGTGGCTAACATCCCTTATCAAATATCATCTCCTCTTACC
TTCAAATTATTGGCTCATAGGCCTCTATTCAGAGCTGCAGTAATAATGTTTCAGAGAGAA
TTTGCTATGAGACTTGTTGCTCAACCTGGTGATACTCTTTATTGCCGCCTTTCGGTGAAC
ACCCAGCTGTTGGCTCGAGTATCGCACTTACTCAAGGTAGGAAAGAATAATTTCAGGCCA
CCACCAAAGGTTGATTCTTCTGTAGTTAGAATTGAACCTAGGAAACCACTTGCTCCTGTC
AATTTTAAGGAGTGGGATGGTTTGGTCAGGATCTGTTTCAACCGGAAAAACAAAACTATA
GGTTCTATTTTTAGACAAAAATCCGTACTCTCTTTGCTGGAAAAAAACTATAGAACTTTG
CAAGCATTGCAACTCGCTGAGAATGTTCCTTCAGAGGATATGGAAATGGCCTTGGATGTA
TCTGCCTTGGGAGAGACATTTGGAGACTTGAGTATGGATGCTGATGATGAGAAGGATGAT
GACGAGATGGAGGTGGATGATGGTGATGCTAAAAGATCTGAATTCAAAGAGAAAGTTTTG
GCAGTGCTAAAGGAAGGGAAATTTGAGGATAAGAGATCTTCCAAGCTCACACAAGCAGAT
TTTATGCACCTACTTTCTCTGTTTAACAAGGCTGGCATACATTTTTCTTGA

Peptide Sequence

PEP ID

XP_016443045.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase-like [Nicotiana tabacum]
Sequence

MAGGKMRRDKPHRGASAGGGGSNPHFQGGISFHKSKGQHILKNPLLVDSIIQKAGIKSTD
VILEIGPGTGNLTKKLLEAGKSVIAVELDPRMVLELQRRFQGTPLSNRLKVIQGDVLKCD
LPYFDICVANIPYQISSPLTFKLLAHRPLFRAAVIMFQREFAMRLVAQPGDTLYCRLSVN
TQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPLAPVNFKEWDGLVRICFNRKNKTI
GSIFRQKSVLSLLEKNYRTLQALQLAENVPSEDMEMALDVSALGETFGDLSMDADDEKDD
DEMEVDDGDAKRSEFKEKVLAVLKEGKFEDKRSSKLTQADFMHLLSLFNKAGIHFS

Transcript Sequence

Gene sequence data has not been registered.